ZNF470-DT

ZNF470 divergent transcript, the group of Divergent transcripts

Basic information

Region (hg38): 19:56545566-56567479

Links

ENSG00000269696 ∙ NCBI:112268241 ∙ ∙ HGNC:55272 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the ZNF470-DT gene.

• Inborn genetic diseases (21 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the ZNF470-DT gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous						0
missense						0
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding			20	1		21
Total	0	0	20	1	0

Variants in ZNF470-DT

This is a list of pathogenic ClinVar variants found in the ZNF470-DT region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
19-56547866-A-T		not specified	Uncertain significance (Aug 08, 2022)
19-56549011-G-A		not specified	Uncertain significance (Oct 04, 2022)
19-56549045-G-C		not specified	Uncertain significance (Apr 07, 2022)
19-56549094-T-G		not specified	Uncertain significance (Sep 01, 2021)
19-56549104-C-G		not specified	Uncertain significance (Jan 09, 2024)
19-56549120-C-T		not specified	Uncertain significance (Jun 02, 2024)
19-56550072-G-C		not specified	Uncertain significance (Feb 14, 2024)
19-56550103-C-T		not specified	Uncertain significance (Sep 27, 2021)
19-56550117-C-G		not specified	Uncertain significance (Nov 28, 2023)
19-56553699-A-T		not specified	Uncertain significance (Aug 11, 2022)
19-56553702-A-G		not specified	Uncertain significance (Dec 05, 2022)
19-56553716-T-C		not specified	Uncertain significance (Apr 01, 2024)
19-56553746-G-C		not specified	Uncertain significance (May 02, 2024)
19-56553798-A-G		not specified	Uncertain significance (Oct 27, 2022)
19-56553803-G-A		not specified	Uncertain significance (Aug 28, 2023)
19-56553813-A-C		not specified	Uncertain significance (Sep 16, 2021)
19-56553885-C-T		not specified	Uncertain significance (Dec 13, 2022)
19-56553947-T-G		not specified	Uncertain significance (Aug 13, 2021)
19-56553996-G-A		not specified	Likely benign (Jun 03, 2024)
19-56554140-A-G		not specified	Uncertain significance (Apr 08, 2024)
19-56554215-A-G		not specified	Uncertain significance (Aug 08, 2022)
19-56554278-A-G		not specified	Uncertain significance (Feb 27, 2023)
19-56554454-G-A		not specified	Uncertain significance (Jun 29, 2022)
19-56554478-G-A		not specified	Uncertain significance (Jun 22, 2021)
19-56554616-C-A		not specified	Uncertain significance (Jun 17, 2024)

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP