GeneBe

ZNF649-AS1

ZNF649 antisense RNA 1, the group of Antisense RNAs

Basic information

Region (hg38): 19:51888023-51900475

Links

ENSG00000268095 ∙ NCBI:101928571 ∙ ∙ HGNC:51285 ∙ ∙ ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the ZNF649-AS1 gene.

  • Inborn genetic diseases (18 variants)

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the ZNF649-AS1 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type Pathogenic Likely pathogenic VUS Likely benign Benign Sum
synonymous
0
missense
0
nonsense
0
start loss
0
frameshift
0
inframe indel
0
splice donor/acceptor (+/-2bp)
0
splice region
0
non coding
17
clinvar
1
clinvar
 18
Total 0 0 17 1 0

Variants in ZNF649-AS1

This is a list of pathogenic ClinVar variants found in the ZNF649-AS1 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position Type Phenotype Significance ClinVar
19-51890692-T-C not specified Uncertain significance (Jan 18, 2023)2455958
19-51890709-C-T not specified Uncertain significance (May 23, 2023)2550620
19-51890728-T-C not specified Likely benign (Jan 03, 2024)3197476
19-51890742-T-C not specified Likely benign (Nov 03, 2023)3197475
19-51890766-C-T not specified Uncertain significance (May 24, 2023)2521227
19-51890803-G-A not specified Uncertain significance (Apr 04, 2024)3259056
19-51890899-T-A not specified Uncertain significance (Dec 19, 2022)2255788
19-51890953-T-C not specified Uncertain significance (Nov 26, 2024)3477633
19-51891103-G-A not specified Uncertain significance (Oct 12, 2024)3477631
19-51891115-T-C not specified Uncertain significance (Oct 30, 2023)3197473
19-51891159-C-G not specified Uncertain significance (Aug 15, 2023)2618831
19-51891207-C-T not specified Uncertain significance (Jul 25, 2023)2614294
19-51891256-C-T not specified Uncertain significance (Mar 29, 2022)2357086
19-51891276-A-T not specified Likely benign (Aug 26, 2022)2378510
19-51891291-C-T not specified Uncertain significance (Dec 05, 2022)2332735
19-51891349-C-T not specified Uncertain significance (Aug 14, 2024)3477628
19-51891381-T-C not specified Uncertain significance (Dec 03, 2021)2263941
19-51891418-C-A not specified Uncertain significance (Oct 19, 2024)3477632
19-51891463-C-T not specified Uncertain significance (Feb 28, 2023)2491780
19-51891517-C-G not specified Uncertain significance (Mar 31, 2023)2531803
19-51891553-C-T not specified Uncertain significance (Jan 30, 2024)2265203
19-51891604-G-C not specified Uncertain significance (Mar 14, 2023)2495874
19-51891616-T-G not specified Uncertain significance (Feb 11, 2022)2277136
19-51891641-G-C not specified Uncertain significance (Aug 01, 2024)3477627
19-51891689-T-G not specified Uncertain significance (Jun 11, 2024)3259055

GnomAD

Source: gnomAD

dbNSFP

Source: dbNSFP