ZNF736

zinc finger protein 736, the group of Zinc fingers C2H2-type

Basic information

Region (hg38): 7:64307459-64356634

Links

ENSG00000234444 ∙ NCBI:728927 ∙ ∙ HGNC:32467 ∙ Uniprot:B4DX44 ∙ AlphaFold ∙ GenCC ∙ jax ∙ Sfari ∙ GnomAD ∙ Pubmed ∙ ClinVar

Phenotypes

GenCC

Source: genCC

No genCC data.

ClinVar

This is a list of variants' phenotypes submitted to ClinVar and linked to the ZNF736 gene.

Variants pathogenicity by type

Statistics on ClinVar variants can assist in determining whether a specific variant type in the ZNF736 gene is commonly pathogenic or not.

In the table, we include only reliable ClinVar variants with their consequences to MANE Select, Mane Plus Clinical transcripts, or transcripts with TSL equals 1. Click the count to view the source variants.

Warning: slight differences between displayed counts and the number of variants in ClinVar may occur, primarily due to (1) the application of a different transcript and/or consequence by our variant effect predictor or (2) differences in clinical significance: we classify Benign/Likely benign variants as Likely benign and Pathogenic/Likely pathogenic variants as Likely pathogenic.

Variant type	Pathogenic	Likely pathogenic	VUS	Likely benign	Benign	Sum
synonymous				2		2
missense			18	2		20
nonsense						0
start loss						0
frameshift						0
inframe indel						0
splice donor/acceptor (+/-2bp)						0
splice region						0
non coding						0
Total	0	0	18	4	0

Variants in ZNF736

This is a list of pathogenic ClinVar variants found in the ZNF736 region.

You can filter this list by clicking the number of variants in the Variants pathogenicity by type table.

Position	Type	Phenotype	Significance	ClinVar
7-64336344-G-A		not specified	Uncertain significance (Dec 20, 2023)
7-64348159-T-G		not specified	Uncertain significance (Jun 21, 2021)
7-64348237-G-A		not specified	Uncertain significance (Dec 01, 2022)
7-64348335-T-C		not specified	Uncertain significance (May 26, 2024)
7-64348375-A-G		not specified	Uncertain significance (Aug 16, 2021)
7-64348388-T-G		not specified	Uncertain significance (Feb 21, 2024)
7-64348435-A-G		not specified	Uncertain significance (Feb 28, 2023)
7-64348452-G-A		not specified	Uncertain significance (Sep 06, 2022)
7-64348579-C-G		not specified	Uncertain significance (Aug 21, 2023)
7-64348587-T-A		not specified	Uncertain significance (Aug 21, 2023)
7-64348614-C-A		not specified	Uncertain significance (Feb 08, 2023)
7-64348629-C-A		not specified	Uncertain significance (Sep 27, 2021)
7-64348640-T-C			Likely benign (Oct 01, 2022)
7-64348667-C-T			Likely benign (Oct 01, 2022)
7-64348701-A-G		not specified	Uncertain significance (Aug 02, 2023)
7-64348771-A-G		not specified	Uncertain significance (Feb 23, 2023)
7-64348804-C-A		not specified	Likely benign (Mar 05, 2024)
7-64348840-C-T		not specified	Uncertain significance (Jul 13, 2021)
7-64348842-G-C		not specified	Uncertain significance (Mar 29, 2022)
7-64348938-C-A		not specified	Uncertain significance (Dec 13, 2021)
7-64348950-C-T		not specified	Uncertain significance (Jun 29, 2023)
7-64348963-G-A		not specified	Uncertain significance (Apr 19, 2024)
7-64348986-A-G		not specified	Likely benign (Nov 09, 2022)
7-64349003-C-G		not specified	Uncertain significance (Apr 08, 2024)
7-64349113-G-T		not specified	Uncertain significance (Dec 05, 2022)

GnomAD

Source: gnomAD

Gene	Type	Bio Type	Transcript	Coding Exons	Length
ZNF736	protein_coding	protein_coding	ENST00000423484	4	47402

pLI Probability LOF Intolerant	pRec Probability LOF Recessive	Individuals with no LOFs	Individuals with Homozygous LOFs	Individuals with Heterozygous LOFs	Defined	p
0.000313	0.372	123017	0	2	123019	0.00000813

	Z-Score	Observed	Expected	Observed/Expected	Mutation Rate	Total Possible in Transcript
Missense	0.925	163	200	0.816	0.00000918	2827
Missense in Polyphen		48	58.069	0.8266		875
Synonymous	0.942	59	69.0	0.856	0.00000323	697
Loss of Function	-0.143	5	4.67	1.07	1.97e-7	62

LoF frequencies by population

Ethnicity	Sum of pLOFs	p
African & African-American	0.00	0.00
Ashkenazi Jewish	0.00	0.00
East Asian	0.00	0.00
Finnish	0.00	0.00
European (Non-Finnish)	0.00000964	0.00000901
Middle Eastern	0.00	0.00
South Asian	0.0000333	0.0000329
Other	0.00	0.00

dbNSFP

Source: dbNSFP

• Function: FUNCTION: May be involved in transcriptional regulation. {ECO:0000250}.
• Pathway: Gene expression (Transcription);Generic Transcription Pathway;RNA Polymerase II Transcription (Consensus)

Intolerance Scores

• rvis_EVS: 1.35
• rvis_percentile_EVS: 94.3

Haploinsufficiency Scores

• hipred: N
• hipred_score: 0.148

Essentials

• essential_gene_CRISPR: N
• gene_indispensability_pred: N
• gene_indispensability_score: 0.114

Gene Damage Prediction

	All	Recessive	Dominant
Mendelian	Medium	Medium	Medium
Primary Immunodeficiency	Medium	Medium	High
Cancer	Medium	Medium	Medium

Gene ontology

• Biological process: regulation of transcription by RNA polymerase II
• Cellular component: nucleus
• Molecular function: DNA-binding transcription factor activity, RNA polymerase II-specific;DNA binding;metal ion binding