1-7827433-T-G
Variant summary
Our verdict is Uncertain significance. Variant got 0 ACMG points: 2P and 2B. PM2BP4_Moderate
The NM_001377275.1(PER3):āc.2504T>Gā(p.Leu835Arg) variant causes a missense change involving the alteration of a non-conserved nucleotide. The variant was absent in control chromosomes in GnomAD project. In-silico tool predicts a benign outcome for this variant. 15/21 in silico tools predict a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.
Frequency
Consequence
NM_001377275.1 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 0 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | MANE | UniProt |
---|---|---|---|---|---|---|---|
PER3 | NM_001377275.1 | c.2504T>G | p.Leu835Arg | missense_variant | 18/22 | ENST00000377532.8 |
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | TSL | MANE | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|
PER3 | ENST00000377532.8 | c.2504T>G | p.Leu835Arg | missense_variant | 18/22 | 1 | NM_001377275.1 | A2 | |
PER3 | ENST00000361923.2 | c.2480T>G | p.Leu827Arg | missense_variant | 17/21 | 1 | P2 | ||
PER3 | ENST00000614998.4 | c.2504T>G | p.Leu835Arg | missense_variant | 18/23 | 1 | A2 | ||
PER3 | ENST00000613533.4 | c.2504T>G | p.Leu835Arg | missense_variant | 18/22 | 5 | A2 |
Frequencies
GnomAD3 genomes Cov.: 34
GnomAD4 exome Data not reliable, filtered out with message: AC0 AF: 0.00 AC: 0AN: 1461842Hom.: 0 Cov.: 62 AF XY: 0.00 AC XY: 0AN XY: 727230
GnomAD4 genome Cov.: 34
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at