10-73949409-T-TTTTATTTA

Variant summary

Our verdict is Uncertain significance. The variant received 0 ACMG points: 0P and 0B.

No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.

Frequency

Genomes: 𝑓 0.00072 ( 1 hom., cov: 0)

Consequence

Unknown

Scores

Not classified

Clinical Significance

Not reported in ClinVar

Conservation

PhyloP100: -0.143

Publications

2 publications found
Variant links:

Genome browser will be placed here

ACMG classification

Our verdict: Uncertain_significance. The variant received 0 ACMG points.

Variant Effect in Transcripts

 

RefSeq Transcripts

Sel.
GeneTranscriptTagsHGVScHGVSpEffectExon RankProteinUniProt

There are no transcript annotations for this variant.

Ensembl Transcripts

Sel.
GeneTranscriptTagsHGVScHGVSpEffectExon RankProteinUniProt

There are no transcript annotations for this variant.

Frequencies

GnomAD3 genomes
AF:
0.000719
AC:
97
AN:
134926
Hom.:
1
Cov.:
0
show subpopulations
Gnomad AFR
AF:
0.000471
Gnomad AMI
AF:
0.00
Gnomad AMR
AF:
0.000306
Gnomad ASJ
AF:
0.000603
Gnomad EAS
AF:
0.00109
Gnomad SAS
AF:
0.000734
Gnomad FIN
AF:
0.000705
Gnomad MID
AF:
0.00
Gnomad NFE
AF:
0.000956
Gnomad OTH
AF:
0.00
We have no GnomAD4 exomes data on this position. Probably position not covered by the project.
GnomAD4 genome
AF:
0.000719
AC:
97
AN:
134964
Hom.:
1
Cov.:
0
AF XY:
0.000696
AC XY:
45
AN XY:
64628
show subpopulations
African (AFR)
AF:
0.000470
AC:
17
AN:
36136
American (AMR)
AF:
0.000306
AC:
4
AN:
13076
Ashkenazi Jewish (ASJ)
AF:
0.000603
AC:
2
AN:
3316
East Asian (EAS)
AF:
0.00109
AC:
5
AN:
4578
South Asian (SAS)
AF:
0.000737
AC:
3
AN:
4070
European-Finnish (FIN)
AF:
0.000705
AC:
5
AN:
7092
Middle Eastern (MID)
AF:
0.00
AC:
0
AN:
274
European-Non Finnish (NFE)
AF:
0.000956
AC:
61
AN:
63818
Other (OTH)
AF:
0.00
AC:
0
AN:
1770
Allele Balance Distribution
Red line indicates average allele balance
Average allele balance: 0.511
Heterozygous variant carriers
0
4
9
13
18
22
0.00
0.20
0.40
0.60
0.80
0.95
Allele balance

Age Distribution

Genome Het
Variant carriers
0
2
4
6
8
10
<30
30-35
35-40
40-45
45-50
50-55
55-60
60-65
65-70
70-75
75-80
>80
Age
Alfa
AF:
0.00
Hom.:
738

ClinVar

Not reported in ClinVar

Computational scores

Source: dbNSFP v4.9

Name
Calibrated prediction
Score
Prediction
PhyloP100
-0.14

Splicing

Find out detailed SpliceAI scores and Pangolin per-transcript scores at spliceailookup.broadinstitute.org

Publications

Other links and lift over

dbSNP: rs3998225; hg19: chr10-75709167; API