11-102845217-A-AG

Variant summary

Our verdict is Uncertain significance. The variant received 0 ACMG points: 0P and 0B.

The variant allele was found at a frequency of 0.000306 in 22,846 control chromosomes in the GnomAD database, with no homozygous occurrence. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.

Frequency

Genomes: 𝑓 0.00031 ( 0 hom., cov: 33)

Consequence

Unknown

Scores

Not classified

Clinical Significance

Not reported in ClinVar

Conservation

PhyloP100: -0.343

Publications

188 publications found
Variant links:

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ACMG classification

Our verdict: Uncertain_significance. The variant received 0 ACMG points.

Transcripts

RefSeq

Gene Transcript HGVSc HGVSp Effect Exon rank MANE Protein UniProt

Ensembl

Gene Transcript HGVSc HGVSp Effect Exon rank TSL MANE Protein Appris UniProt

Frequencies

GnomAD3 genomes
AF:
0.000306
AC:
7
AN:
22848
Hom.:
0
Cov.:
33
show subpopulations
Gnomad AFR
AF:
0.00528
Gnomad AMI
AF:
0.00
Gnomad AMR
AF:
0.00
Gnomad ASJ
AF:
0.00
Gnomad EAS
AF:
0.00
Gnomad SAS
AF:
0.00
Gnomad FIN
AF:
0.00
Gnomad MID
AF:
0.0185
Gnomad NFE
AF:
0.000172
Gnomad OTH
AF:
0.00
We have no GnomAD4 exomes data on this position. Probably position not covered by the project.
GnomAD4 genome
AF:
0.000306
AC:
7
AN:
22846
Hom.:
0
Cov.:
33
AF XY:
0.0000927
AC XY:
1
AN XY:
10790
show subpopulations
African (AFR)
AF:
0.00528
AC:
3
AN:
568
American (AMR)
AF:
0.00
AC:
0
AN:
1798
Ashkenazi Jewish (ASJ)
AF:
0.00
AC:
0
AN:
514
East Asian (EAS)
AF:
0.00
AC:
0
AN:
88
South Asian (SAS)
AF:
0.00
AC:
0
AN:
278
European-Finnish (FIN)
AF:
0.00
AC:
0
AN:
1648
Middle Eastern (MID)
AF:
0.0208
AC:
1
AN:
48
European-Non Finnish (NFE)
AF:
0.000172
AC:
3
AN:
17406
Other (OTH)
AF:
0.00
AC:
0
AN:
334
Allele Balance Distribution
Red line indicates average allele balance
Average allele balance: 0.461
Heterozygous variant carriers
0
1
1
2
2
3
0.00
0.20
0.40
0.60
0.80
0.95
Allele balance

Age Distribution

Genome Het
Variant carriers
0
2
4
6
8
10
<30
30-35
35-40
40-45
45-50
50-55
55-60
60-65
65-70
70-75
75-80
>80
Age
Alfa
AF:
0.00
Hom.:
0

ClinVar

Not reported in ClinVar

Computational scores

Source: dbNSFP v4.3

Name
Calibrated prediction
Score
Prediction
PhyloP100
-0.34

Splicing

Find out detailed SpliceAI scores and Pangolin per-transcript scores at spliceailookup.broadinstitute.org

Publications

Other links and lift over

dbSNP: rs3025058; hg19: chr11-102715948; API