11-69639561-ACC-ACCC
Variant names:
Variant summary
Our verdict is Uncertain significance. The variant received 0 ACMG points: 0P and 0B.
The ENST00000754571.1(ENSG00000298300):n.435dupC variant causes a non coding transcript exon change involving the alteration of a non-conserved nucleotide. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.
Frequency
Genomes: 𝑓 0.000021 ( 0 hom., cov: 0)
Consequence
ENSG00000298300
ENST00000754571.1 non_coding_transcript_exon
ENST00000754571.1 non_coding_transcript_exon
Scores
Not classified
Clinical Significance
Not reported in ClinVar
Conservation
PhyloP100: -0.952
Publications
2 publications found
Genes affected
Genome browser will be placed here
ACMG classification
Classification was made for transcript
Our verdict: Uncertain_significance. The variant received 0 ACMG points.
Transcripts
RefSeq
| Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
|---|
Ensembl
| Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | TSL | MANE | Protein | Appris | UniProt |
|---|---|---|---|---|---|---|---|---|---|---|
| ENSG00000298300 | ENST00000754571.1 | n.435dupC | non_coding_transcript_exon_variant | Exon 1 of 1 |
Frequencies
GnomAD3 genomes 0.0000213 AC: 3AN: 140892Hom.: 0 Cov.: 0 show subpopulations
GnomAD3 genomes
AF:
AC:
3
AN:
140892
Hom.:
Cov.:
0
Gnomad AFR
AF:
Gnomad AMI
AF:
Gnomad AMR
AF:
Gnomad ASJ
AF:
Gnomad EAS
AF:
Gnomad SAS
AF:
Gnomad FIN
AF:
Gnomad MID
AF:
Gnomad NFE
AF:
Gnomad OTH
AF:
We have no GnomAD4 exomes data on this position. Probably position not covered by the project.
GnomAD4 genome 0.0000213 AC: 3AN: 140892Hom.: 0 Cov.: 0 AF XY: 0.0000295 AC XY: 2AN XY: 67832 show subpopulations
GnomAD4 genome
AF:
AC:
3
AN:
140892
Hom.:
Cov.:
0
AF XY:
AC XY:
2
AN XY:
67832
show subpopulations
African (AFR)
AF:
AC:
1
AN:
37478
American (AMR)
AF:
AC:
2
AN:
13478
Ashkenazi Jewish (ASJ)
AF:
AC:
0
AN:
3408
East Asian (EAS)
AF:
AC:
0
AN:
4726
South Asian (SAS)
AF:
AC:
0
AN:
4452
European-Finnish (FIN)
AF:
AC:
0
AN:
8408
Middle Eastern (MID)
AF:
AC:
0
AN:
298
European-Non Finnish (NFE)
AF:
AC:
0
AN:
65840
Other (OTH)
AF:
AC:
0
AN:
1918
Allele Balance Distribution
Red line indicates average allele balance
Average allele balance: 0.492
Heterozygous variant carriers
0
0
1
1
2
2
0.00
0.20
0.40
0.60
0.80
0.95
Allele balance
Alfa
AF:
Hom.:
ClinVar
Not reported inComputational scores
Source:
Name
Calibrated prediction
Score
Prediction
PhyloP100
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at
Publications
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