14-24291558-G-A
Variant summary
Our verdict is Benign. Variant got -8 ACMG points: 0P and 8B. BA1
The NM_001136050.3(DHRS1):c.722C>T(p.Thr241Ile) variant causes a missense, splice region change. The variant allele was found at a frequency of 0.0683 in 1,613,984 control chromosomes in the GnomAD database, including 4,223 homozygotes. In-silico tool predicts a benign outcome for this variant. 2/3 splice prediction tools predicting alterations to normal splicing. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another nucleotide change resulting in the same amino acid substitution has been previously reported as Likely benign in UniProt.
Frequency
Consequence
NM_001136050.3 missense, splice_region
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Benign. Variant got -8 ACMG points.
Transcripts
RefSeq
Ensembl
Frequencies
GnomAD3 genomes AF: 0.0853 AC: 12982AN: 152116Hom.: 611 Cov.: 32
GnomAD3 exomes AF: 0.0754 AC: 18951AN: 251492Hom.: 818 AF XY: 0.0768 AC XY: 10436AN XY: 135920
GnomAD4 exome AF: 0.0665 AC: 97237AN: 1461750Hom.: 3612 Cov.: 31 AF XY: 0.0682 AC XY: 49594AN XY: 727190
GnomAD4 genome AF: 0.0853 AC: 12988AN: 152234Hom.: 611 Cov.: 32 AF XY: 0.0850 AC XY: 6331AN XY: 74458
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at