15-84657289-G-C
Variant summary
Our verdict is Uncertain significance. Variant got 0 ACMG points: 2P and 2B. PM2BP4_Moderate
The NM_021077.4(NMB):c.217C>G(p.Pro73Ala) variant causes a missense change involving the alteration of a non-conserved nucleotide. The variant was absent in control chromosomes in GnomAD project. In-silico tool predicts a benign outcome for this variant. 13/21 in silico tools predict a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another variant affecting the same amino acid position, but resulting in a different missense (i.e. P73T) has been classified as Likely benign.
Frequency
Consequence
NM_021077.4 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 0 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
---|---|---|---|---|---|---|---|---|
NMB | NM_021077.4 | c.217C>G | p.Pro73Ala | missense_variant | Exon 2 of 3 | ENST00000360476.8 | NP_066563.2 | |
NMB | NM_205858.2 | c.217C>G | p.Pro73Ala | missense_variant | Exon 2 of 3 | NP_995580.1 | ||
NMB | XM_017022239.2 | c.*111C>G | downstream_gene_variant | XP_016877728.1 |
Ensembl
Frequencies
GnomAD3 genomes Cov.: 31
GnomAD3 exomes AF: 0.00000450 AC: 1AN: 222298Hom.: 0 AF XY: 0.00 AC XY: 0AN XY: 120524
GnomAD4 exome Cov.: 33
GnomAD4 genome Cov.: 31
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at