4-161385900-G-C
Variant summary
Our verdict is Uncertain significance. Variant got 2 ACMG points: 2P and 0B. PM2
The NM_020116.5(FSTL5):c.2391C>G(p.Asn797Lys) variant causes a missense change. The variant was absent in control chromosomes in GnomAD project. Variant has been reported in ClinVar as Uncertain significance (★).
Frequency
Consequence
NM_020116.5 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 2 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
---|---|---|---|---|---|---|---|---|
FSTL5 | NM_020116.5 | c.2391C>G | p.Asn797Lys | missense_variant | Exon 16 of 16 | ENST00000306100.10 | NP_064501.2 | |
FSTL5 | NM_001128427.3 | c.2388C>G | p.Asn796Lys | missense_variant | Exon 16 of 16 | NP_001121899.1 | ||
FSTL5 | NM_001128428.3 | c.2361C>G | p.Asn787Lys | missense_variant | Exon 15 of 15 | NP_001121900.1 | ||
FSTL5 | XM_011532126.1 | c.2364C>G | p.Asn788Lys | missense_variant | Exon 15 of 15 | XP_011530428.1 |
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | TSL | MANE | Protein | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|---|
FSTL5 | ENST00000306100.10 | c.2391C>G | p.Asn797Lys | missense_variant | Exon 16 of 16 | 1 | NM_020116.5 | ENSP00000305334.4 | ||
FSTL5 | ENST00000379164.8 | c.2388C>G | p.Asn796Lys | missense_variant | Exon 16 of 16 | 1 | ENSP00000368462.4 | |||
FSTL5 | ENST00000427802.2 | c.2361C>G | p.Asn787Lys | missense_variant | Exon 15 of 15 | 1 | ENSP00000389270.2 | |||
ENSG00000249568 | ENST00000508189.1 | n.323G>C | non_coding_transcript_exon_variant | Exon 2 of 2 | 2 |
Frequencies
GnomAD3 genomes Cov.: 32
GnomAD4 exome Cov.: 31
GnomAD4 genome Cov.: 32
ClinVar
Submissions by phenotype
not specified Uncertain:1
The c.2391C>G (p.N797K) alteration is located in exon 16 (coding exon 15) of the FSTL5 gene. This alteration results from a C to G substitution at nucleotide position 2391, causing the asparagine (N) at amino acid position 797 to be replaced by a lysine (K). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear. -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at
Publications
No publications associated with this variant yet.