17-35150068-G-A
Variant summary
Our verdict is Likely benign. Variant got -3 ACMG points: 0P and 3B. BP4BP6BS2_Supporting
The NM_001267052.2(UNC45B):c.226G>A(p.Asp76Asn) variant causes a missense change involving the alteration of a conserved nucleotide. The variant allele was found at a frequency of 0.0000472 in 1,608,620 control chromosomes in the GnomAD database, with no homozygous occurrence. In-silico tool predicts a benign outcome for this variant. Variant has been reported in ClinVar as Likely benign (no stars).
Frequency
Consequence
NM_001267052.2 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Likely_benign. Variant got -3 ACMG points.
Transcripts
RefSeq
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | TSL | MANE | Protein | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|---|
UNC45B | ENST00000394570.7 | c.226G>A | p.Asp76Asn | missense_variant | Exon 4 of 20 | 1 | NM_001267052.2 | ENSP00000378071.2 | ||
UNC45B | ENST00000591048.2 | c.226G>A | p.Asp76Asn | missense_variant | Exon 3 of 17 | 1 | ENSP00000468335.1 | |||
UNC45B | ENST00000268876.9 | c.226G>A | p.Asp76Asn | missense_variant | Exon 4 of 20 | 5 | ENSP00000268876.4 |
Frequencies
GnomAD3 genomes AF: 0.0000657 AC: 10AN: 152134Hom.: 0 Cov.: 32
GnomAD3 exomes AF: 0.000163 AC: 40AN: 246004Hom.: 0 AF XY: 0.000195 AC XY: 26AN XY: 133028
GnomAD4 exome AF: 0.0000453 AC: 66AN: 1456368Hom.: 0 Cov.: 30 AF XY: 0.0000580 AC XY: 42AN XY: 724342
GnomAD4 genome AF: 0.0000657 AC: 10AN: 152252Hom.: 0 Cov.: 32 AF XY: 0.000121 AC XY: 9AN XY: 74442
ClinVar
Submissions by phenotype
UNC45B-related disorder Benign:1
This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications). -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at