19-9251264-A-C
Variant summary
Our verdict is Uncertain significance. Variant got 1 ACMG points: 1P and 0B. PP3
The NM_001079935.2(OR7E24):āc.221A>Cā(p.His74Pro) variant causes a missense change. In-silico tool predicts a pathogenic outcome for this variant. Variant has been reported in ClinVar as Uncertain significance (ā ).
Frequency
Consequence
NM_001079935.2 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 1 ACMG points.
Transcripts
RefSeq
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | TSL | MANE | Protein | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|---|
OR7E24 | ENST00000456448.3 | c.221A>C | p.His74Pro | missense_variant | Exon 1 of 1 | 6 | NM_001079935.2 | ENSP00000387523.1 | ||
OR7E24 | ENST00000641946.1 | c.209A>C | p.His70Pro | missense_variant | Exon 2 of 2 | ENSP00000494223.1 |
Frequencies
GnomAD3 genomes AF: 0.00 AC: 21AN: 151734Hom.: 0 Cov.: 32 FAILED QC
GnomAD4 exome Data not reliable, filtered out with message: AS_VQSR AF: 0.00319 AC: 4633AN: 1450218Hom.: 0 Cov.: 34 AF XY: 0.00306 AC XY: 2209AN XY: 721898
GnomAD4 genome Data not reliable, filtered out with message: AS_VQSR AF: 0.000138 AC: 21AN: 151856Hom.: 0 Cov.: 32 AF XY: 0.000162 AC XY: 12AN XY: 74204
ClinVar
Submissions by phenotype
not specified Uncertain:1
The c.221A>C (p.H74P) alteration is located in exon 1 (coding exon 1) of the OR7E24 gene. This alteration results from a A to C substitution at nucleotide position 221, causing the histidine (H) at amino acid position 74 to be replaced by a proline (P). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear. -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at