8-144098924-G-A
Variant summary
Our verdict is Uncertain significance. Variant got 2 ACMG points: 2P and 0B. PM2
The NM_030974.4(SHARPIN):c.1118C>T(p.Thr373Ile) variant causes a missense change. The variant allele was found at a frequency of 0.00000139 in 1,442,638 control chromosomes in the GnomAD database, with no homozygous occurrence. Variant has been reported in ClinVar as Uncertain significance (★).
Frequency
Consequence
NM_030974.4 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 2 ACMG points.
Transcripts
RefSeq
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | TSL | MANE | Protein | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|---|
SHARPIN | ENST00000398712.7 | c.1118C>T | p.Thr373Ile | missense_variant | Exon 8 of 9 | 1 | NM_030974.4 | ENSP00000381698.2 | ||
SHARPIN | ENST00000359551.6 | n.*12C>T | non_coding_transcript_exon_variant | Exon 7 of 8 | 1 | ENSP00000352551.6 | ||||
SHARPIN | ENST00000359551.6 | n.*12C>T | 3_prime_UTR_variant | Exon 7 of 8 | 1 | ENSP00000352551.6 | ||||
SHARPIN | ENST00000532536.5 | c.242C>T | p.Thr81Ile | missense_variant | Exon 3 of 3 | 3 | ENSP00000432355.1 |
Frequencies
GnomAD3 genomes Cov.: 33
GnomAD4 exome AF: 0.00000139 AC: 2AN: 1442638Hom.: 0 Cov.: 31 AF XY: 0.00000139 AC XY: 1AN XY: 717830
GnomAD4 genome Cov.: 33
ClinVar
Submissions by phenotype
not specified Uncertain:1
The c.1118C>T (p.T373I) alteration is located in exon 8 (coding exon 8) of the SHARPIN gene. This alteration results from a C to T substitution at nucleotide position 1118, causing the threonine (T) at amino acid position 373 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear. -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at
Publications
No publications associated with this variant yet.