8-24499305-A-C
Variant summary
Our verdict is Benign. Variant got -12 ACMG points: 0P and 12B. BP4_StrongBA1
The NM_003817.4(ADAM7):āc.1912A>Cā(p.Asn638His) variant causes a missense change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.327 in 1,597,378 control chromosomes in the GnomAD database, including 87,595 homozygotes. In-silico tool predicts a benign outcome for this variant. 14/20 in silico tools predict a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another nucleotide change resulting in the same amino acid substitution has been previously reported as Likely benign in UniProt.
Frequency
Consequence
NM_003817.4 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Benign. Variant got -12 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
---|---|---|---|---|---|---|---|---|
ADAM7 | NM_003817.4 | c.1912A>C | p.Asn638His | missense_variant | Exon 17 of 22 | ENST00000175238.10 | NP_003808.2 | |
ADAM7-AS1 | NR_125808.1 | n.79+49235T>G | intron_variant | Intron 1 of 5 | ||||
ADAM7-AS2 | NR_125809.1 | n.447-7145T>G | intron_variant | Intron 3 of 4 |
Ensembl
Frequencies
GnomAD3 genomes AF: 0.328 AC: 49859AN: 151814Hom.: 8377 Cov.: 32
GnomAD3 exomes AF: 0.345 AC: 82754AN: 240074Hom.: 15154 AF XY: 0.344 AC XY: 44783AN XY: 130008
GnomAD4 exome AF: 0.327 AC: 472766AN: 1445446Hom.: 79202 Cov.: 31 AF XY: 0.330 AC XY: 237015AN XY: 719016
GnomAD4 genome AF: 0.329 AC: 49914AN: 151932Hom.: 8393 Cov.: 32 AF XY: 0.332 AC XY: 24613AN XY: 74242
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at