NM_001102470.2:c.649G>A
Variant summary
Our verdict is Uncertain significance. Variant got 2 ACMG points: 2P and 0B. PM2
The NM_001102470.2(ADH6):c.649G>A(p.Ala217Thr) variant causes a missense change. The variant allele was found at a frequency of 0.000152 in 1,613,826 control chromosomes in the GnomAD database, with no homozygous occurrence. Variant has been reported in ClinVar as Uncertain significance (★).
Frequency
Consequence
NM_001102470.2 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 2 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
---|---|---|---|---|---|---|---|---|
ADH6 | NM_001102470.2 | c.649G>A | p.Ala217Thr | missense_variant | Exon 6 of 9 | ENST00000394899.6 | NP_001095940.1 | |
ADH6 | NM_000672.4 | c.649G>A | p.Ala217Thr | missense_variant | Exon 6 of 8 | NP_000663.1 | ||
ADH6 | NR_132990.2 | n.384G>A | non_coding_transcript_exon_variant | Exon 4 of 7 | ||||
LOC100507053 | NR_037884.1 | n.3789+4416C>T | intron_variant | Intron 4 of 9 |
Ensembl
Frequencies
GnomAD3 genomes AF: 0.0000986 AC: 15AN: 152088Hom.: 0 Cov.: 32
GnomAD3 exomes AF: 0.000128 AC: 32AN: 250930Hom.: 0 AF XY: 0.000170 AC XY: 23AN XY: 135592
GnomAD4 exome AF: 0.000157 AC: 230AN: 1461620Hom.: 0 Cov.: 31 AF XY: 0.000153 AC XY: 111AN XY: 727126
GnomAD4 genome AF: 0.0000986 AC: 15AN: 152206Hom.: 0 Cov.: 32 AF XY: 0.0000672 AC XY: 5AN XY: 74416
ClinVar
Submissions by phenotype
not specified Uncertain:1
The c.649G>A (p.A217T) alteration is located in exon 6 (coding exon 6) of the ADH6 gene. This alteration results from a G to A substitution at nucleotide position 649, causing the alanine (A) at amino acid position 217 to be replaced by a threonine (T). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear. -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at