chr10-70170920-C-CTTTTTTTTT

Variant summary

Our verdict is Uncertain significance. The variant received 0 ACMG points: 0P and 0B.

No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.

Frequency

Genomes: 𝑓 0.00021 ( 1 hom., cov: 0)

Consequence

Unknown

Scores

Not classified

Clinical Significance

Not reported in ClinVar

Conservation

PhyloP100: -0.120

Publications

1 publications found
Variant links:

Genome browser will be placed here

ACMG classification

Our verdict: Uncertain_significance. The variant received 0 ACMG points.

Variant Effect in Transcripts

 

RefSeq Transcripts

Selected
GeneTranscriptTagsHGVScHGVSpEffectExon RankProteinUniProt

There are no transcript annotations for this variant.

Ensembl Transcripts

Selected
GeneTranscriptTagsHGVScHGVSpEffectExon RankProteinUniProt

There are no transcript annotations for this variant.

Frequencies

GnomAD3 genomes
AF:
0.000205
AC:
15
AN:
73072
Hom.:
1
Cov.:
0
show subpopulations
Gnomad AFR
AF:
0.000605
Gnomad AMI
AF:
0.00
Gnomad AMR
AF:
0.00
Gnomad ASJ
AF:
0.00
Gnomad EAS
AF:
0.00
Gnomad SAS
AF:
0.00
Gnomad FIN
AF:
0.00
Gnomad MID
AF:
0.00
Gnomad NFE
AF:
0.000118
Gnomad OTH
AF:
0.00
We have no GnomAD4 exomes data on this position. Probably position not covered by the project.
GnomAD4 genome
AF:
0.000205
AC:
15
AN:
73084
Hom.:
1
Cov.:
0
AF XY:
0.000155
AC XY:
5
AN XY:
32174
show subpopulations
African (AFR)
AF:
0.000604
AC:
10
AN:
16544
American (AMR)
AF:
0.00
AC:
0
AN:
5502
Ashkenazi Jewish (ASJ)
AF:
0.00
AC:
0
AN:
2340
East Asian (EAS)
AF:
0.00
AC:
0
AN:
2058
South Asian (SAS)
AF:
0.00
AC:
0
AN:
1652
European-Finnish (FIN)
AF:
0.00
AC:
0
AN:
928
Middle Eastern (MID)
AF:
0.00
AC:
0
AN:
74
European-Non Finnish (NFE)
AF:
0.000118
AC:
5
AN:
42480
Other (OTH)
AF:
0.00
AC:
0
AN:
924
Allele Balance Distribution
Red line indicates average allele balance
Average allele balance: 0.502
Heterozygous variant carriers
0
1
2
4
5
6
0.00
0.20
0.40
0.60
0.80
0.95
Allele balance

Age Distribution

Genome Het
Variant carriers
0
2
4
6
8
10
<30
30-35
35-40
40-45
45-50
50-55
55-60
60-65
65-70
70-75
75-80
>80
Age

ClinVar

Not reported in ClinVar

Computational scores

Source: dbNSFP v4.9

Name
Calibrated prediction
Score
Prediction
PhyloP100
-0.12

Splicing

Find out detailed SpliceAI scores and Pangolin per-transcript scores at spliceailookup.broadinstitute.org

Publications

Other links and lift over

dbSNP: rs5785963; hg19: chr10-71930676; API