chr18-54294435-G-A
Variant summary
Our verdict is Benign. Variant got -12 ACMG points: 0P and 12B. BP4_StrongBA1
The NM_007195.3(POLI):c.2191G>A(p.Ala731Thr) variant causes a missense change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.714 in 1,607,918 control chromosomes in the GnomAD database, including 412,972 homozygotes. In-silico tool predicts a benign outcome for this variant. 14/20 in silico tools predict a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another nucleotide change resulting in the same amino acid substitution has been previously reported as Likely benign in UniProt.
Frequency
Consequence
NM_007195.3 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Benign. Variant got -12 ACMG points.
Transcripts
RefSeq
Ensembl
Frequencies
GnomAD3 genomes AF: 0.773 AC: 117549AN: 151988Hom.: 46335 Cov.: 32
GnomAD3 exomes AF: 0.720 AC: 176904AN: 245858Hom.: 64556 AF XY: 0.721 AC XY: 95905AN XY: 133008
GnomAD4 exome AF: 0.707 AC: 1029985AN: 1455812Hom.: 366586 Cov.: 35 AF XY: 0.709 AC XY: 513453AN XY: 723990
GnomAD4 genome AF: 0.773 AC: 117645AN: 152106Hom.: 46386 Cov.: 32 AF XY: 0.774 AC XY: 57549AN XY: 74342
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at