rs149382483
Variant summary
Our verdict is Uncertain significance. Variant got 0 ACMG points: 2P and 2B. PM2BP4_Moderate
The NM_213674.1(TPM2):c.773-710G>T variant causes a intron change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.000000767 in 1,303,850 control chromosomes in the GnomAD database, with no homozygous occurrence. In-silico tool predicts a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.
Frequency
Consequence
NM_213674.1 intron
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 0 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
---|---|---|---|---|---|---|---|---|
TPM2 | NM_001301226.2 | c.773-710G>T | intron_variant | Intron 8 of 8 | NP_001288155.1 | |||
TPM2 | NM_213674.1 | c.773-710G>T | intron_variant | Intron 8 of 8 | NP_998839.1 | |||
TPM2 | NM_003289.4 | c.*286G>T | downstream_gene_variant | ENST00000645482.3 | NP_003280.2 | |||
TPM2 | NM_001301227.2 | c.*286G>T | downstream_gene_variant | NP_001288156.1 |
Ensembl
Frequencies
GnomAD3 genomes Cov.: 32
GnomAD4 exome AF: 7.67e-7 AC: 1AN: 1303850Hom.: 0 Cov.: 32 AF XY: 0.00000156 AC XY: 1AN XY: 639694
GnomAD4 genome Cov.: 32
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at
Publications
No publications associated with this variant yet.