rs377145979
Variant summary
Our verdict is Uncertain significance. Variant got 1 ACMG points: 2P and 1B. PM2BP4
The NM_022489.4(INF2):c.2755C>A(p.Leu919Ile) variant causes a missense change. The variant allele was found at a frequency of 0.00000137 in 1,460,230 control chromosomes in the GnomAD database, with no homozygous occurrence. In-silico tool predicts a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another variant affecting the same amino acid position, but resulting in a different missense (i.e. L919V) has been classified as Uncertain significance.
Frequency
Consequence
NM_022489.4 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 1 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | MANE | UniProt |
---|---|---|---|---|---|---|---|
INF2 | NM_022489.4 | c.2755C>A | p.Leu919Ile | missense_variant | 18/23 | ENST00000392634.9 | |
INF2 | NM_001031714.4 | c.2755C>A | p.Leu919Ile | missense_variant | 18/22 |
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | TSL | MANE | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|
INF2 | ENST00000392634.9 | c.2755C>A | p.Leu919Ile | missense_variant | 18/23 | 5 | NM_022489.4 | P4 |
Frequencies
GnomAD3 genomes ? Cov.: 33
GnomAD3 exomes AF: 0.00000806 AC: 2AN: 248034Hom.: 0 AF XY: 0.00000740 AC XY: 1AN XY: 135050
GnomAD4 exome AF: 0.00000137 AC: 2AN: 1460230Hom.: 0 Cov.: 36 AF XY: 0.00000138 AC XY: 1AN XY: 726404
GnomAD4 genome ? Cov.: 33
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at