rs534671276
Variant summary
Our verdict is Uncertain significance. Variant got 2 ACMG points: 2P and 0B. PM2
The NM_001371194.2(SEMA4D):c.1070G>C(p.Arg357Pro) variant causes a missense change. The variant allele was found at a frequency of 0.0000081 in 1,604,198 control chromosomes in the GnomAD database, with no homozygous occurrence. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another variant affecting the same amino acid position, but resulting in a different missense (i.e. R357H) has been classified as Uncertain significance.
Frequency
Consequence
NM_001371194.2 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 2 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | MANE | UniProt |
---|---|---|---|---|---|---|---|
SEMA4D | NM_001371194.2 | c.1070G>C | p.Arg357Pro | missense_variant | 11/16 | ENST00000422704.7 |
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | TSL | MANE | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|
SEMA4D | ENST00000422704.7 | c.1070G>C | p.Arg357Pro | missense_variant | 11/16 | 1 | NM_001371194.2 | P1 |
Frequencies
GnomAD3 genomes ? AF: 0.0000394 AC: 6AN: 152224Hom.: 0 Cov.: 34
GnomAD3 exomes AF: 0.00000415 AC: 1AN: 241040Hom.: 0 AF XY: 0.00000763 AC XY: 1AN XY: 131076
GnomAD4 exome AF: 0.00000482 AC: 7AN: 1451974Hom.: 0 Cov.: 30 AF XY: 0.00000554 AC XY: 4AN XY: 722586
GnomAD4 genome ? AF: 0.0000394 AC: 6AN: 152224Hom.: 0 Cov.: 34 AF XY: 0.0000134 AC XY: 1AN XY: 74360
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at