rs740494
Variant summary
Our verdict is Benign. Variant got -12 ACMG points: 0P and 12B. BP4_StrongBA1
The ENST00000689608.1(ENSG00000282564):n.329+10215C>G variant causes a intron, non coding transcript change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.186 in 151,950 control chromosomes in the GnomAD database, including 2,926 homozygotes. In-silico tool predicts a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.
Frequency
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Benign. Variant got -12 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | MANE | UniProt |
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Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | TSL | MANE | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|
ENST00000689608.1 | n.329+10215C>G | intron_variant, non_coding_transcript_variant | |||||||
ENST00000685406.1 | n.241+10215C>G | intron_variant, non_coding_transcript_variant | |||||||
ENST00000692577.2 | n.318+10215C>G | intron_variant, non_coding_transcript_variant | |||||||
ENST00000702785.1 | n.263+10215C>G | intron_variant, non_coding_transcript_variant |
Frequencies
GnomAD3 genomes ? AF: 0.186 AC: 28268AN: 151832Hom.: 2931 Cov.: 32
GnomAD4 genome ? AF: 0.186 AC: 28255AN: 151950Hom.: 2926 Cov.: 32 AF XY: 0.188 AC XY: 13993AN XY: 74294
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at