rs895381
Variant summary
Our verdict is Benign. Variant got -12 ACMG points: 0P and 12B. BP4_StrongBA1
The ENST00000654772.1(C5orf64):n.207+1259T>C variant causes a intron, non coding transcript change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.552 in 152,086 control chromosomes in the GnomAD database, including 24,094 homozygotes. In-silico tool predicts a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.
Frequency
Consequence
ENST00000654772.1 intron, non_coding_transcript
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Benign. Variant got -12 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | MANE | UniProt |
---|
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | #exon/exons | TSL | MANE | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|
C5orf64 | ENST00000654772.1 | n.207+1259T>C | intron_variant, non_coding_transcript_variant | ||||||
C5orf64 | ENST00000657803.1 | n.171+1259T>C | intron_variant, non_coding_transcript_variant | ||||||
C5orf64 | ENST00000659478.1 | n.207+1259T>C | intron_variant, non_coding_transcript_variant |
Frequencies
GnomAD3 genomes ? AF: 0.552 AC: 83862AN: 151968Hom.: 24075 Cov.: 32
GnomAD4 genome ? AF: 0.552 AC: 83917AN: 152086Hom.: 24094 Cov.: 32 AF XY: 0.562 AC XY: 41753AN XY: 74342
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at