chr7-141972905-G-A
Variant summary
Our verdict is Benign. Variant got -12 ACMG points: 0P and 12B. BP4_StrongBA1
The NM_176817.5(TAS2R38):c.785C>T(p.Ala262Val) variant causes a missense change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.533 in 1,613,670 control chromosomes in the GnomAD database, including 234,660 homozygotes. In-silico tool predicts a benign outcome for this variant. 12/20 in silico tools predict a benign outcome for this variant. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar. Another nucleotide change resulting in the same amino acid substitution has been previously reported as Likely benign in UniProt.
Frequency
Consequence
NM_176817.5 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Benign. Variant got -12 ACMG points.
Transcripts
RefSeq
Ensembl
Frequencies
GnomAD3 genomes AF: 0.472 AC: 71667AN: 151720Hom.: 17877 Cov.: 30
GnomAD3 exomes AF: 0.499 AC: 125330AN: 251078Hom.: 33291 AF XY: 0.515 AC XY: 69949AN XY: 135696
GnomAD4 exome AF: 0.540 AC: 788886AN: 1461832Hom.: 216776 Cov.: 72 AF XY: 0.543 AC XY: 395198AN XY: 727214
GnomAD4 genome AF: 0.472 AC: 71688AN: 151838Hom.: 17884 Cov.: 30 AF XY: 0.474 AC XY: 35175AN XY: 74192
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at