chr8-93780845-A-G
Variant summary
Our verdict is Benign. Variant got -20 ACMG points: 0P and 20B. BP4_StrongBP6_Very_StrongBA1
The NM_153704.6(TMEM67):c.870-29A>G variant causes a intron change involving the alteration of a non-conserved nucleotide. The variant allele was found at a frequency of 0.00325 in 1,595,426 control chromosomes in the GnomAD database, including 153 homozygotes. In-silico tool predicts a benign outcome for this variant. Variant has been reported in ClinVar as Benign (★★).
Frequency
Consequence
NM_153704.6 intron
Scores
Clinical Significance
Conservation
Genome browser will be placed here
ACMG classification
Verdict is Benign. Variant got -20 ACMG points.
Transcripts
RefSeq
Ensembl
Frequencies
GnomAD3 genomes AF: 0.0180 AC: 2743AN: 152194Hom.: 91 Cov.: 32
GnomAD3 exomes AF: 0.00456 AC: 1142AN: 250452Hom.: 35 AF XY: 0.00342 AC XY: 464AN XY: 135612
GnomAD4 exome AF: 0.00169 AC: 2441AN: 1443114Hom.: 62 Cov.: 28 AF XY: 0.00144 AC XY: 1033AN XY: 718712
GnomAD4 genome AF: 0.0180 AC: 2744AN: 152312Hom.: 91 Cov.: 32 AF XY: 0.0172 AC XY: 1281AN XY: 74466
ClinVar
Submissions by phenotype
not specified Benign:2
- -
Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed. -
not provided Benign:2
- -
- -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at