rs200975172
Variant summary
Our verdict is Uncertain significance. Variant got 0 ACMG points: 2P and 2B. PM2BP4_Moderate
The NM_000324.3(RHAG):c.1212+5T>G variant causes a splice region, intron change involving the alteration of a non-conserved nucleotide. The variant was absent in control chromosomes in GnomAD project. In-silico tool predicts a benign outcome for this variant. 3/3 splice prediction tools predict no significant impact on normal splicing. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar.
Frequency
Consequence
NM_000324.3 splice_region, intron
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 0 ACMG points.
Transcripts
RefSeq
Ensembl
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | TSL | MANE | Protein | Appris | UniProt |
---|---|---|---|---|---|---|---|---|---|---|
RHAG | ENST00000371175.10 | c.1212+5T>G | splice_region_variant, intron_variant | Intron 9 of 9 | 1 | NM_000324.3 | ENSP00000360217.4 | |||
RHAG | ENST00000646272.1 | c.1217T>G | p.Leu406Arg | missense_variant | Exon 9 of 10 | ENSP00000494337.1 | ||||
RHAG | ENST00000646963.1 | c.1138+307T>G | intron_variant | Intron 8 of 8 | ENSP00000495337.1 | |||||
RHAG | ENST00000646939.1 | c.*34+5T>G | splice_region_variant, intron_variant | Intron 8 of 8 | ENSP00000494709.1 |
Frequencies
GnomAD3 genomes Cov.: 33
GnomAD4 exome Cov.: 27
GnomAD4 genome Cov.: 33
ClinVar
Not reported inComputational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at