rs985403776
Variant summary
Our verdict is Uncertain significance. Variant got 0 ACMG points: 2P and 2B. PM2BP4_Moderate
The NM_001387751.1(DMTN):c.673G>A(p.Asp225Asn) variant causes a missense change. The variant allele was found at a frequency of 0.0000124 in 1,447,144 control chromosomes in the GnomAD database, with no homozygous occurrence. In-silico tool predicts a benign outcome for this variant. Variant has been reported in ClinVar as Uncertain significance (★).
Frequency
Consequence
NM_001387751.1 missense
Scores
Clinical Significance
Conservation
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ACMG classification
Verdict is Uncertain_significance. Variant got 0 ACMG points.
Transcripts
RefSeq
Gene | Transcript | HGVSc | HGVSp | Effect | Exon rank | MANE | Protein | UniProt |
---|---|---|---|---|---|---|---|---|
DMTN | NM_001387751.1 | c.673G>A | p.Asp225Asn | missense_variant | Exon 9 of 16 | ENST00000358242.6 | NP_001374680.1 |
Ensembl
Frequencies
GnomAD3 genomes Cov.: 31
GnomAD3 exomes AF: 0.0000132 AC: 3AN: 227654Hom.: 0 AF XY: 0.00 AC XY: 0AN XY: 122804
GnomAD4 exome AF: 0.0000124 AC: 18AN: 1447144Hom.: 0 Cov.: 31 AF XY: 0.00000835 AC XY: 6AN XY: 718606
GnomAD4 genome Cov.: 31
ClinVar
Submissions by phenotype
not specified Uncertain:1
The c.673G>A (p.D225N) alteration is located in exon 9 (coding exon 8) of the DMTN gene. This alteration results from a G to A substitution at nucleotide position 673, causing the aspartic acid (D) at amino acid position 225 to be replaced by an asparagine (N). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear. -
Computational scores
Source:
Splicing
Find out detailed SpliceAI scores and Pangolin per-transcript scores at