Databases by @genebe
This is a list of databases submitted by @genebe. You can also view these databases in a browser.
abraom
ABraOM/SABE allele frequencies
alfa
ALFA: Allele Frequency Aggregator
alpha-missense
Title of alpha-missense
alpha_missense
Title of alpha_missense
asc
ASC autism case/control exome results
bayesdel_noaf
BayesDel noAF
bipex
BipEx bipolar disorder case/control exome results
cadd_hg19
CADD is a tool for scoring the deleteriousness
cadd_hg38
CADD is a tool for scoring the deleteriousness
cardioboost-arrhythmias-hg19
CardioBoost Arrhythmias
cardioboost-arrhythmias-hg38
CardioBoost Arrhythmias
cardioboost-cardiomyopathies-hg19
CardioBoost Cardiomyopathies
cardioboost-cardiomyopathies-hg38
CardioBoost Cardiomyopathies
cardioboost_arrhythmias_hg19
CardioBoost Arrhythmias
cardioboost_arrhythmias_hg38
CardioBoost Arrhythmias
cardioboost_cardiomyopathies_hg19
CardioBoost Cardiomyopathies
cardioboost_cardiomyopathies_hg38
CardioBoost Cardiomyopathies
cbioportal_hg38
cBioPortal hg38
ccrs_hg19
Title of ccrs_hg19
ccrs_hg38
Title of ccrs_hg38
civic
CivicDB
clinpred_hg19
ClinPred hg19
clinpred_hg38
ClinPred hg38
clinvar
A Public Database of Genetic Variants
dann_hg19
DANN: Deep Learning-Based Variant Annotation Database
dann_hg38
DANN: Deep Learning-Based Variant Annotation Database, GRCh38 version
dbscsnv-hg19
dbscSNV1.1 hg19
dbscsnv-hg38
dbscSNV1.1 hg38
dbscsnv_hg38
dbscSNV1.1 hg38
dbsnp
dbSNP
dbsnp_hg19
The Single Nucleotide Polymorphism Database, hg19
dvd-hg19
Deafness Variation Database hg19
dvd_hg38
Deafness Variation Database hg38
epi25
Epi25 epilepsy case/control exome results
func_vep
FuncVEP-CTI missense variant effect score
genomeasia100k_hg19
Genome Asia 100k hg19
genomeasia100k_hg38
Genome Asia 100k hg38
gnomad-exomes-depth
Depth of the GnomAD Exomes
gnomad-exomes2
Title of gnomad-exomes2
gnomad-exomes4
Genome Aggregation Database Exomes 4.1.0, GRCh38,
gnomad-genomes2
Genome Aggregation Database Genomes 2.1.1, GRCh37,
gnomad-genomes4
Genome Aggregation Database Genomes 4.1.0, GRCh38,
gnomad-total4
Genome Aggregation Database Genomes and Exomes 4.1.0, GRCh38,
gnomad2-exomes-hg19
GnomAD Exomes hg19, v. 2.1.1 - Genome Aggregation Database
gnomad2-genomes-hg19
GnomAD Genomes hg19, v. 2 - Genome Aggregation Database
gnomad3-genomes-depth
Depth of the GnomAD3 Genomes
gnomad3-mito
GnomAD Mitochondrial data
gnomad3_mito
GnomAD Mitochondrial data
gnomad_exomes2_hg19
Genome Aggregation Database Exomes 2.1.1, GRCh37,
gnomad_exomes2_hg38
Genome Aggregation Database Exomes 2.1.1, GRCh38,
gnomad_exomes4
Genome Aggregation Database Exomes 4.1.0, GRCh38,
gnomad_exomes_depth
Depth of the GnomAD Exomes
gnomad_genomes2_hg19
Genome Aggregation Database Genomes 2.1.1, GRCh37,
gnomad_genomes2_hg38
Genome Aggregation Database Genomes 2.1.1, GRCh38,
gnomad_genomes3
Genome Aggregation Database Genomes 3, GRCh38,
gnomad_genomes4
Genome Aggregation Database Genomes 4.1.0, GRCh38,
gnomad_mnv_coding_hg38
Genome Aggregation Database Exomes MNV Coding AF
gnomad_sv4
Genome Aggregation Database Structural Variants 4.1.0, GRCh38,
gnomad_total4
Genome Aggregation Database Genomes and Exomes 4.1.0, GRCh38,
gpn-msa
GPN-MSA - genomic pretrained network with multiple-sequence alignment
gpn_msa
GPN-MSA - genomic pretrained network with multiple-sequence alignment
helixmtdb
HelixMtDB
mitomap-disease
Mitomap Disease
mitomap-polymorphisms
Mitomap Polymorphisms
mitomap_disease
Mitomap Disease
mitomap_polymorphisms
Mitomap Polymorphisms
moalmanac
Molecular Oncology Almanac
mpc_hg38
MPC, GRCh38
mutation-taster
Precomputed MutationTaster 2021 Annotations for Genetic Variant Interpretation
mutation-taster_hg19
Precomputed MutationTaster 2021 Annotations for Genetic Variant Interpretation hg19
mutation-taster_hg38
Precomputed MutationTaster 2021 Annotations for Genetic Variant Interpretation hg38
mutation_taster_hg38
Precomputed MutationTaster 2021 Annotations for Genetic Variant Interpretation hg38
mutpred_hg38
MutPred, GRCh38
mutsplicedb-hg38
MutSpliceDB HG38
mutsplicedb_hg38
MutSpliceDB HG38
pangolin
Pangolin masked splice gain/loss scores
phastcons100_hg19
phastCons100
phastcons100_hg38
phastCons100
phylop100_hg19
phylop100
phylop100_hg38
phylop100
popeve
popEVE proteome-wide missense pathogenicity score
primateai3d
PrimateAI_3D
promoterai
PromoterAI
qatar
Qatari Genome allele frequencies
revel
REVEL - Rare Exome Variant Ensemble Learner
revel_hg19
REVEL hg19
schema
SCHEMA schizophrenia case/control exome results
spliceai
SOTA Splicing Variants impact predictions
splicevardb-hg38
SpliceVarDB HG38
splicevardb_hg38
SpliceVarDB HG38
tommo61kjpn
ToMMo 61KJPN allele frequencies
topmed
Topmed
turkish_variome
Turkish Variome allele frequencies
uk10k_hg19
UK10K hg19
uk10k_hg38
UK10K hg38
varity
Improved pathogenicity prediction for rare human missense variants
varity_hg38
VARITY
wbbc
Westlake BioBank for Chinese allele frequencies